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Table 2 Elements present in the promoter regions of subfamily I of HKTs in rice according to the PLANT CARE database

From: In silico analysis of high affinity potassium transporter (HKT) isoforms in different plants

Function Motif HKT1;1 HKT1;3 HKT1;4 HKT71;4 HKT81;5
AJ491816 AJ491818 AK10985 AK120889 AK108663
ABA ABRE 1 - 2 2 -
IIB - - 1 1 -
CE3 - - 1 1 -
Salicylic acid TCA 2 1 - - -
Ethylene ERE - - - - -
Auxin AuxRR-core 2 - - - -
TGA 1 - - - -
Gibberellin P-Box - - - - -
GARE - - - - 1
MYB MBS 2 2 1 1 1
Defence&stress TC-reach - 1 2 2 1
Heat stress HSE 3 3 - - -
Low temperature LTR 2 - - - -
Fungal elicitor BOX-W1 - 1 - - -
Wound WUN - - 1 1 -
Anaerobic ARE 1 1 1 1 -
MejA TGACG 2 - - - 1
CGTCA 2 - - - 1
High transcription level 5UTR Py-rich stretch 1 1 - - -
Meristem expression CAT-BOX 2 - - - -
Endosperm expression SKn-1 - 2 - 2 -
MYBHv1 CCAAT-box - - 1 1 -
Cell cycle regulation MSA - - 1 1 -
Seed specific regulation RY-element - - 2 2 -
Endosperm negative expression AACA - - - - 1
Zein metabolism regulation O2-site - 1 1 1 2
Anoxic specific inducibility GC - - - - -
Circadian control Circadian - - 1 1 2
Differentiation of the palisade HD-Zip1 2 - - - -
Leaf morphology development HD-Zip2 1 - - - -
Protein binding site HD-Zip3 - - - - 1
BOXIII 1 1 - - -
ATCT - - - - -
I-box - 1 2 - -
TCT - - - - -
G-BOX - - 2 2 -
GAG 1 - 2 2 -
GT1 - - - - 1
ATC 1 - - - -
1 - - - - 1
CATT - 1 - - -
F-box - - - - -
Light responsive Chs-CMA2a - - - - -
GATA - 1 - - -
ACE - - 1 1 -
BOX4 - - 1 1 2
GA - - - 1 -
  LAMP - - 2 1 -
MRE - - 1 1 -
SP1 - - 1 1 1
MNF1 - - - - 2
TGGCA - - - - 1
As-2-box - - - - -
  AE-BOX - - 1 1 -
Promoter & enhancer CAAT-box 36 28 18 18 18
Core promoter TATA 10 27 51 51 56