Table 1 Elements present in the promoter region of TaHKT1;5 (bread wheat) and TmHKT1;5 (wild wheat) according to the PLANT CARE database
From: In silico analysis of high affinity potassium transporter (HKT) isoforms in different plants
cis element | TmHKT1;5 | TaHKT1;5 | Function |
|---|---|---|---|
CAAT-box | 12 | 7 | Common cis-acting element in promoter and enhancer regions |
Circadian | 2 | 2 | cis-acting regulatory element involved in circadian control |
CATT-motif | 2 | 2 | Part of a light-responsive element |
AE-box | 0 | 1 | Part of a module for light response |
G-box | 2 | 1 | cis-acting regulatory element involved in light responsiveness |
MRE | 0 | 1 | myb binding site involved in light responsiveness |
LTR | 2 | 2 | cis-acting element involved in low-temperature responsiveness |
TC-rich repeats | 1 | 1 | cis-acting element involved in defence and stress responsiveness |
ARE | 1 | 0 | cis-acting regulatory element essential for the anaerobic induction |
Box 4 | 1 | 1 | Part of a conserved DNA module involved in light responsiveness |
Box I | 1 | 1 | Light-responsive element |
ERE | 1 | 1 | Ethylene-responsive element |
HSE | 1 | 2 | cis-acting element involved in heat stress responsiveness |
Skn-1_motif | 1 | 1 | cis-acting regulatory element required for endosperm expression |
TATA-box | 22 | 18 | Core promoter element approximately −30 of the transcription start |
ACE | 1 | 1 | cis-acting element involved in light responsiveness |
I-box | 2 | 0 | Part of a light-responsive element |
MNF1 | 1 | 1 | Light-responsive element |
O2-site | 1 | 0 | cis-acting regulatory element involved in zein metabolism regulation |
ATCT-motif | 1 | 1 | Part of a conserved DNA module involved in light responsiveness |
CCAAT-box | 1 | 1 | mybHv1 binding site |
CGTCA-motif | 2 | 1 | cis-acting regulatory element involved in the MeJA-responsiveness |
Sp1 | 2 | 3 | Light-responsive element |
TGA-element | 1 | 1 | Auxin-responsive element |
TGACG-motif | 2 | 1 | cis-acting regulatory element involved in the MeJA-responsiveness |
GARE-motif | 1 | 1 | Gibberellin-responsive element |
CCGTCC-box | 0 | 1 | cis-acting regulatory element related to meristem specific activation |
A-box | 0 | 1 | cis-acting regulatory element |