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Table 3 Genes up-regulated 1.5-fold in UV-B experiment

From: Transcriptional responses to biologically relevant doses of UV-B radiation in the model archaeon, Halobacteriumsp. NRC-1

    Fold increase Fold increase Fold increase
    UV-B *30 J.m-2 UV-B *5 J.m-2 UV-B *5 J.m-2
Gene   wild type wild type Δ uvr A Δ uvr C
ID name   1 h 3 h 1 h 3 h 1 h 3 h
genes up-regulated in all three UV-B experiments       
17 vng17 NA 1.88 1.55 1.59 1.48 1.46 2.45
779 arj 1 Archaeal RecJ-like exonuclease 1.62 1.73 1.34 1.57 1.23 1.58
884 top 6A DNA topoisomerase VI subunit A 1.48 1.58 1.57 1.82 1.35 1.68
885 top 6B DNA topoisomerase VI subunit B 1.54 1.54 1.31 1.74 1.23 1.68
1642 vng1642 Hypothetical protein VNG1642 4.44 3.82 2.06 2.75 2.10 1.25
1644 nrd J Class II ribonucleotide reductase alpha subunit 3.65 3.59 1.87 2.53 1.67 2.53
2174 vng2174 NA 1.47 1.80 1.40 1.69 -1.65 1.92
2473 rad A1 RadA/RecA recombinase 9.32 6.74 2.42 4.66 2.21 3.26
6194 vng6194 NA 1.80 2.20 1.88 2.44 1.13 4.04
genes up-regulated only in wild type UV-B *30 J and UV-B *5 J experiments       
280 vng280 hypothetical protein VNG0280 1.66 1.54 1.48 1.49 1.14 1.40
2600 trx A2 thioredoxin 1.55 1.36 1.51 1.38 1.14 -1.37
genes up-regulated only in UV-B *5 J experiments, wild-type and mutant       
18 vng18 NA 1.20 1.26 1.27 1.50 1.57 3.03
20 vng20 NA 1.10 1.04 1.10 1.84 -1.10 1.70
6339 vng6339 NA 1.10 -1.05 1.99 1.02 1.44 2.30
6361 npa Predicted transposase 1.16 1.03 2.10 2.73 1.66 3.01
genes up-regulated only in wild type UV-B *30 J and UV-B *5 J mutant experiments       
2115 vng2115 NA 1.64 1.78 1.43 1.19 1.03 1.60
5233 vng5233 NA -1.05 1.57 -1.08 1.08 1.11 1.46
6316 arc C Carbamate kinase 2.63 1.46 1.35 1.01 1.79 1.00
  1. Note: NA = not annotated