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Table 1 Selected genes significantly altered under low salinity growth

From: Transcriptional profiling of the model Archaeon Halobacteriumsp. NRC-1: responses to changes in salinity and temperature

Gene ID Gene name Former name COG Predicted function Fold change values log2(x) ratio Standard deviation of log2(x) ratio
101 cspD1   1278 cold shock protein 1.442 0.502 0.275
491 dnaK   443 heat shock protein -1.307 -0.376 0.172
727 dfr   534 DinF-related damage-inducible protein -2.079 -1.019 0.316
1013 htr13   840 Htr13 transducer 1.656 0.649 0.482
1121 aspC2   436 aspartate aminotransferase 1.694 0.688 0.453
1190 sod1   605 superoxide dismutase 1.826 0.852 0.221
1332 sod2   605 superoxide dismutase 2.023 0.988 0.290
1408 ush   737 UDP-sugar hydrolase -1.393 -0.468 0.165
1442 htr12   840 Htr12 transducer 1.406 0.490 0.058
1632 cbiQ   619 cobalt transport protein -1.265 -0.324 0.214
1634 cbiN   1930 cobalt transport protein -1.553 -0.580 0.400
1691 rpl23p   89 50S ribosomal protein L23P -1.454 -0.533 0.138
1692 rpl2p   90 50S ribosomal protein L2P -1.515 -0.594 0.128
1695 rpl22p   91 50S ribosomal protein L22P -1.447 -0.523 0.173
1698 rpl29p   255 50S ribosomal protein L29P -1.460 -0.535 0.176
1801 hsp1   71 small heat shock protein 2.248 1.006 0.679
1814 carB   458 carbamoyl-phosphate synthase large subunit -1.590 -0.646 0.261
1815 carA   505 carbamoyl-phosphate synthase small subunit -1.452 -0.520 0.225
1924 trkA6   569 TRK potassium uptake system protein 2.040 1.006 0.251
2093 glnA   174 glutamine synthatase -1.719 -0.766 0.212
2116 xup   2252 xanthine/uracil permease family protein -1.603 -0.647 0.307
2139 atpA   1155 H+-transporting ATP synthase subunit A -1.482 -0.555 0.189
2140 atpF   1436 H+-transporting ATP synthase subunit F -1.536 -0.608 0.177
2141 atpC   1527 H+-transporting ATP synthase subunit C -1.637 -0.694 0.221
2142 atpE   1390 H+-transporting ATP synthase subunit E -1.706 -0.761 0.173
2143 atpK   636 H+-transporting ATP synthase subunit K -1.658 -0.719 0.173
2144 atpI   1269 H+-transporting ATP synthase subunit I -1.816 -0.830 0.295
2281 gst   435 glutathione S-transferase 1.508 0.573 0.235
2344 dppD1 oppD2 444 oligopeptide ABC transporter -1.562 -0.611 0.301
2346 dppC1 dppC2 1173 dipeptide ABC transporter permease -1.436 -0.488 0.307
2347 dppB1 dppB1 601 dipeptide ABC transporter permease -1.581 -0.649 0.182
2358 appA   747 oligopeptide binding protein 1.893 0.841 0.485
2359 appB   601 oligopeptide ABC permease 1.506 0.548 0.350
2616 cxp   2317 Carboxypeptidase -2.194 -1.113 0.247
5076 trxA1    Thioredoxin -1.424 -0.491 0.235
5142 tbpC   2101 transcription initiation factor IID 1.748 0.743 0.430
6313 nhaC3   1757 Na+/H+ antiporter -1.280 -0.348 0.146